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Virology ; 552: 107-111, 2021 01 02.
Article in English | MEDLINE | ID: covidwho-899647

ABSTRACT

Nisin, a food-grade antimicrobial peptide produced by lactic acid bacteria has been examined for its probable interaction with the human ACE2 (hACE2) receptor, the site where spike protein of SARS-CoV-2 binds. Among the eight nisin variants examined, nisin H, nisin Z, nisin U and nisin A showed a significant binding affinity towards hACE2, higher than that of the RBD (receptor binding domain) of the SARS-CoV-2 spike protein. The molecular interaction of nisin with hACE2 was investigated by homology modeling and docking studies. Further, binding efficiency of the most potent nisin H was evaluated through the interaction of hACE2:nisin H complex with RBD (receptor-binding domain) of SARS-CoV-2 and that of hACE2:RBD complex with nisin H. Here, nisin H acted as a potential competitor of RBD to access the hACE2 receptor. The study unravels for the first time that a globally used food preservative, nisin has the potential to bind to hACE2.


Subject(s)
Angiotensin-Converting Enzyme 2/metabolism , Nisin/metabolism , Receptors, Virus/metabolism , Spike Glycoprotein, Coronavirus/metabolism , Amino Acid Sequence , Angiotensin-Converting Enzyme 2/chemistry , Binding Sites , Humans , Models, Molecular , Molecular Docking Simulation , Nisin/chemistry , Protein Binding , Protein Domains , Receptors, Virus/chemistry , Sequence Alignment , Spike Glycoprotein, Coronavirus/chemistry
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